Dissipative particle dynamics

Dissipative particle dynamics (DPD) is an off-lattice mesoscopic simulation technique[1] which involves a set of particles moving in continuous space and discrete time. Particles represent whole molecules or fluid regions, rather than single atoms, and atomistic details are not considered relevant to the processes addressed. The particles' internal degrees of freedom are integrated out and replaced by simplified pairwise dissipative and random forces, so as to conserve momentum locally and ensure correct hydrodynamic behaviour. The main advantage of this method is that it gives access to longer time and length scales than are possible using conventional MD simulations. Simulations of polymeric fluids in volumes up to 100 nm in linear dimension for tens of microseconds are now common.

DPD was initially devised by Hoogerbrugge and Koelman[2][3] to avoid the lattice artifacts of the so-called lattice gas automata and to tackle hydrodynamic time and space scales beyond those available with molecular dynamics (MD). It was subsequently reformulated and slightly modified by P. Español[4] to ensure the proper thermal equilibrium state. A series of new DPD algorithms with reduced computational complexity and better control of transport properties are presented.[5] The algorithms presented in this article choose randomly a pair particle for applying DPD thermostating thus reducing the computational complexity.

  1. ^ Santo, Kolattukudy P.; Neimark, Alexander V. (December 2021). "Dissipative particle dynamics simulations in colloid and Interface science: a review". Advances in Colloid and Interface Science. 298: 102545. doi:10.1016/j.cis.2021.102545. PMID 34757286. S2CID 243939224.
  2. ^ Hoogerbrugge, P. J; Koelman, J. M. V. A (1992). "Simulating Microscopic Hydrodynamic Phenomena with Dissipative Particle Dynamics". Europhysics Letters (EPL). 19 (3): 155–160. Bibcode:1992EL.....19..155H. doi:10.1209/0295-5075/19/3/001. ISSN 0295-5075. S2CID 250796817.
  3. ^ Koelman, J. M. V. A; Hoogerbrugge, P. J (1993). "Dynamic Simulations of Hard-Sphere Suspensions Under Steady Shear". Europhysics Letters (EPL). 21 (3): 363–368. Bibcode:1993EL.....21..363K. doi:10.1209/0295-5075/21/3/018. ISSN 0295-5075. S2CID 250913111.
  4. ^ Español, P; Warren, P (1995). "Statistical Mechanics of Dissipative Particle Dynamics". Europhysics Letters (EPL). 30 (4): 191–196. Bibcode:1995EL.....30..191E. doi:10.1209/0295-5075/30/4/001. ISSN 0295-5075. S2CID 14385201.
  5. ^ Goga, N.; Rzepiela, A. J.; de Vries, A. H.; Marrink, S. J.; Berendsen, H. J. C. (2012). "Efficient Algorithms for Langevin and DPD Dynamics". Journal of Chemical Theory and Computation. 8 (10): 3637–3649. doi:10.1021/ct3000876. ISSN 1549-9618. PMID 26593009.

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